robert-koch-str. 2
82152 planegg
germany
tel.: +49 89 895574-0
fax: +49 89 895574-825
www.biomax.com
info@biomax.com
PEDANT™ genome annotation
Biomax Informatics now offers a subscription-based web interface
for complete genome-wide sequence analysis. This web-based
edition of the highly acclaimed Pedant-Pro™ Sequence Analysis
Suite is capable of converting composite genome sequences into
clear and immediately usable information.
Using the PEDANT™ web interface, you obtain all-encompassing
results for complete genome sequence analysis in minutes. The
software provides comprehensive, reliable and relevant gene
features. It delivers precise gene prediction and protein structure
and functional information.
The sequence analysis results are organized to enable an easy
understanding of the biological importance of the data and thereby
enhance decision making and discovery. For each gene and
protein, a comprehensive report provides an overview of relevant
features with links to public and proprietary databases. Easily drill
down to investigate details.
Adds layers of efficiency to functional genomic studies
The software increases the efficiency of research, enables
teamwork and reduces the cost and time for genomic analysis.
The process is conveniently simple and takes just a day or two.
After uploading your raw sequence, completing and sending a
signed form, Biomax will launch the PEDANT analysis. Through
the web interface, you easily access and download the results in
just a few minutes.
Genes
ORFs
Gen
om
ics
Stu
die
s
tRNA
rRNA
SNPs
Biological
Function
Innovate
Discov
er
Analyze
Uploa
d Seq
uence
Annotation
Figure 1: Graphical representation of
the PEDANT genome annotation
subscription-based interface. Upload
sequence, analyze and innovate.
Result components
Graphical representation and drill-down facility make analysis
results more interactive and easy to understand. Genes and related
genetic components are detailed in the DNA Viewer section of the
result view whereas the Protein Viewer provides a comprehensive
overview of protein features of your genome-wide sequence data.
The PEDANT software uses state-of-the-art algorithms generating
the following results:
>
Genes and open reading frames
>
Non-coding elements in DNA and RNA (including tRNA and
rRNA)
>
Protein functions, protein structure and domains
>
Multiple alignments
>
Two- or three-dimensional structural properties assigned to
proteins
Results can be exported in different formats, e.g., FASTA,
EMBL/GenBank
Data security
The PEDANT software allows you to work confidently in a secure
environment. After the analysis is complete, the results are readily
accessible and can be downloaded. The genome sequencing
data uploaded by the user is stored in a private and secure server
in order to ensure security and confidentiality. You can access
the results from anywhere, at anytime, and on any computer
connected to the Internet.
Contact Biomax at
info@biomax.com
for more information.
Biomax, BioRS, BioXM, PEDANT and Pedant-Pro are
registered trademarks of Biomax Informatics AG in Germany
and other countries. Viscovery is a registered trademark of
Viscovery Software GmbH. Registered names, trademarks,
etc., used in this document, even when not specifically
marked as such, are not to be considered unprotected by
law.
PDPROART1302
About Biomax
Biomax Informatics AG (Planegg,
Germany), founded in 1997, is a leader
in the development of customized
bioinformatics solutions. Biomax developed
the well-known Pedant-Pro Sequence
Analysis Suite, the BioRS Integration and
Retrieval System, the BioXM Knowledge
Management Environment and other
computational solutions for better decision
making and knowledge management in
the life science industry. In 2007, Biomax
acquired the Viscovery data mining business
from eudaptics gmbh to complement the
BioXM system with tools to identify and
validate diagnostic biomarkers. Additional
information about Biomax can be found at
the company’s website
www.biomax.com
.