In Chapter 11 we detail the three approach-
es (brute force, clique search, and heuristic
search) for solving the motif finding problem.
This serves a good opportunity to compare the
execution times of the different solutions.
Finally, in the twelfth chapter we introduce
the morphological and molecular phylogenet-
ics, and then we present three algorithms us-
ing different methods (parsimony, distance-
based and likelihood-based).
III.
T
EACHING
M
ETHODS
The slides of these chapters can be present-
ed during lectures, and then we recommend
the following additional lab and/or home
works:
Short exercises (e.g. pair-wise se-
quence alignment).
So-called “weblems” which are using
some sophisticated tools that are to
process some biological archives and
available free over the internet. Typi-
cally, you do not need to install these
tools, but rather the calculation can be
run through directly a web interface.
A couple of final warnings for the instruc-
tors:
A serious problem with the web is that
sites come and go, therefore – even
though our slides provide exact tool-
websites – you should check the best
available tools and archive sites for the
exercises at the time when the course
is given.
Bioinformatics is an extremely fast
growing field, so when you use this
material for teaching, check all numer-
ical data mentioned on the slides, be-
cause some might get completely out
of date and needs to be updated before
the slides are presented.
13
15
Introduction to Electrical Measurements
György Cserey, András Oláh, Attila Tihanyi
Pázmány Péter Catholic University
Faculty of Information Technology
Budapest, Hungary
[cserey,olaha,tihanyia]@itk.ppke.hu
Summary — In this document, a brief sum-
mary of the educational material for the elec-
trical measurements course is presented. The
presented material gives a general engineering
overview for the new students of bionics, in-
formation technology and engineering about
electrical measurements among their profes-
sional subjects. This develops their approach as
engineers and inspires the study of the basic
courses at a high standard.
Keywords - biological and medical measure-
ments; measurement of voltage, current, time
and frequency; signal processing; GPS; net-
works and systems; semiconductor basics; non-
linear resistive networks; logic and binary sys-
tems; microcontrollers;
I.
I
NTRODUCTION
The students studying engineering and the
adjoining areas of engineering are mainly
studying theoretical, basic subjects in the
course of their first few semesters. The
knowledge that they need in the engineering
practice and in their later work will be ac-
quired in the course of subsequent semesters.
The drawback of this is first of all that they
encounter their first engineering problem rela-
tively late, thereby they cannot face their
choice of profession early enough, and a pos-
sible change of studies will result in the loss
of years. Second, the basic subjects often
seem to be too tiresome, leaving the students
unmotivated. The goal of the electrical meas-
urements course is to give a satisfying solu-
tion to both of these problems. It may help
students make a mature decision about their
choice of profession, giving them information
about their choice and helping them decide if
they are fit for the engineering work. At the
same time, it presents the range of bionics,
engineering and information technology that
students will encounter later on. The overview
and experimenting may be inspiring, giving
endurance for the high standard learning of
the basic subjects.
In several universities of the USA, there
are introductory subjects that serve as the first
steps towards an engineering approach, while
giving an overview of the problems of the
specific areas of engineering. The subject pre-
sented here wants to satisfy this function as
well.
A.
Highschool background
Basically, this subject sets two prerequi-
sites for students: knowledge of mathematics
and physics. The learning of these is set for
the first semester, and an additional physics
revision is also compulsory.
II.
M
ETHODS
The goal of the electrical measurements
course and material is to give a general view
of the basic theory and practice of electrical
engineering to the bionics and information
technology students who enter university,
moreover, without exaggeration, they can
catch a glimpse of the whole of information
technology, electrical engineering and bionics.
The novelty of this material can be found in
this fact: it breaks away from the concept that
each and every scientific area should be dis-
cussed in detail for 1, 2 or 3 semesters, and
the whole knowledge is put together at the end
of the 3-5 year training. Instead, it aims at a