Schrödinger Software Release 2015-2
450
Index
element
changing .....................................................
95
finding.........................................................
37
entries..................................................................
6
adding properties to ..................................
228
combining .................................................
206
copying and pasting properties .................
206
copying properties ....................................
233
creating ...............................................
29
,
179
deleting .....................................................
209
displaying in Workspace...........................
203
duplicating ................................................
205
excluding ..................................................
203
excluding, using plots ...............................
292
filtering .............................................
197
–
200
fixing and unfixing ...................................
203
groups .......................
179
,
189
,
191
,
194
,
208
importing ..................................................
179
including ...................................................
203
including, using plots ...............................
292
incorporating from job output ..................
180
marking.....................................................
220
merging.............................................
180
,
206
merging on connection or fusion ................
98
moving ......................................................
210
properties ..........................................
226
–
248
renaming ...................................................
204
selecting............................................
197
–
202
selecting from plots ..................................
291
selecting randomly ...................................
201
sorting ...............................................
185
,
211
splitting by molecule ................................
207
stepping through in Workspace ................
203
superimposing ..........................................
254
target .................................................
184
,
358
tiling............................................................
70
See also properties
entry groups—see groups, entry
entry ID ...........................................................
179
Entry List panel...............................................
225
Entry Selection dialog box..............................
198
Entry Selection Language (ESL) ....................
198
environment variables
BABEL_DIR
.................................................
45
DISPLAY
.....................................................
12
LOCALAPPDATA
(Windows) .....................
337
SCHRODINGER
............................................
12
SCHRODINGER_SCRIPTS
.................
333
,
387
SCHRODINGER_TEMP_PROJECT
.............
337
ePlayer ....................................................
216
–
219
reference structure ....................................
219
speed.........................................................
219
toolbar controls.........................................
217
ePlayer Options panel .....................................
218
error
reporting, in PDB conversion...................
51
ESL—see Entry Selection Language (ESL)
excluded entries ..............................................
184
exponential notation........................................
236
Export dialog box .............................................
52
Export to Canvas dialog box.............................
61
Extended Radius Surface panel ......................
300
extended radius surfaces—see surfaces
F
family—see property family
feedback
atom properties ...................................
24
,
358
entry properties.................................
171
,
358
from picking .............................................
348
Workspace contents ....................................
23
Feedback button ..............................................
171
file extensions, preferences for .......................
337
file format
export, selecting..........................................
53
import, selecting .........................................
43
Maestro, description .................................
417
Maestro, example .....................................
419
recognized ..................................................
45
files
exporting data to .........................................
57
importing data from....................................
58
importing structures from.........................
179
overwriting .................................................
54
selecting for import ....................................
43
writing structures to....................................
52
filters, entry .....................................................
198
Find toolbar
main window ..............................................
36
Project Table panel ...................................
196
finding atoms ....................................................
36
fixed entries.....................................................
184
Flexible Ligand Alignment panel ...................
258
fog .....................................................................
77