16S and 23s ribosomal rna mutation Database Triman K. L. x000B 16S and 23S ribosomal rna mutations x000B database summary

PSCDB Takayuki Amemiya
Protein Structural Change upon ligand binding
database summary
PseudoBase Batenburg, F.H.D. van¹, Gultyaev, A.P.¹, Pleij, C.W.A.²
Structural, functional and sequence data related to RNA pseudoknots
database summary
Pseudofam
Eukaryotic pseudogenes assigned to different protein families
database summary
PseudoGene Karro JE, Yan Y, Zheng D, Zhang Z, Carriero N, Cayting P, Harrrison P. and Gerstein M.
Pseudogenes in eukaryotic and prokaryotic genomes
database summary
Pseudomonas Genome Database Brinkman, F. and Geoff Winsor, G.
Pseudomonas genome database and community annotation project
database summary
PSI-SGKB
Protein Structure Initiative Structural Genomics Knowledgebase
database summary
PSIbase Gong, S.¹, Yoon, G. ², Jang, I. ³, Bolser, D. ⁴, Dafas, P. ⁵, Schroeder, M. ⁶, Choi, S. ¹, Lee, S. ¹, Cho, Y.², Han, K. ⁷, Lee, S. ³, Lappe, M. ⁸, Holm, L. ⁹, Kim, S. ³, Oh, D. ², Bhak, J. ^1,2,3,10
Interaction of proteins with known 3D structures
database summary
PSORTdb
Protein subcellular localization in bacteria
database summary
PSSRdb Pankaj Kumar, Pasumarthy S. Chaitanya, and Hampapathalu A. Nagarajaram
Polymorphic Simple Sequence Repeats Database
database summary
pSTIING Ng A., Bursteinas B., Gao Q., Mollison E. and Zvelebil M.
Protein-protein, protein-lipid and protein-small molecule interactions
database summary
PTCH1 Mutation Database
Mutations and SNPs found in PTCH1
database summary
PTGL Patrick May, Annika Kreuchwig, Thomas Steinke, and Ina Koch
Protein Topology Graph library: Secondary structure-based protein topologies
database summary
PTM-Switchboard
Post-translational modifications of yeast transcription factors
database summary
PTMcode Peer Bork
Functional associations between posttranslational modifications within proteins
database summary
PubChem Wang, Yanli'; Bolton, Evan; Bryant, Steve; Xiao, Jewen; suzek, tugba; Zhang, Jian!; Wang, Jiyao; Zhou, Zhigang'; Han, Lianyi; Karapetian, Karen; Dracheva, Svetlana; Shoemaker, Benjamin; Gindulyte, Asta
Structures and biological activities of small organic molecules
database summary
PubMed
Citations and abstracts of biomedical literature
database summary
PubMeth
Links between DNA methylation levels and cancer
database summary


qPrimerDepot
Quantitative real time PCR primers for human and mouse RefSeq sequences
database summary
QTL Matchmaker Star K.V.^1,2, Song Q.², Zhu A.² and Böttinger E.P.²
Quantitative trait loci information for human, mouse and rat
database summary
QuadBase
G-quadruplex motifs in the promoters of human, chimpanzee, rat, mouse and bacterial genes
database summary
Quorumpeps Bart De Spiegeleer
A database of quorum-sensing peptides
database summary


R.E.DD.B.
RESP and ESP atomic charges and force field libraries for small molecules and molecular fragments
database summary
RAP-DB Ohyanagi H.^1,2, Tanaka T.³, Sakai H.³, Shigemoto Y.^1,4, Yamaguchi K.⁵, Habara T.^5,6, Fujii Y.^5,6, Antonio B.A.³, Nagamura Y.³, Imanishi T.⁶, Ikeo K.¹, Itoh T.^3,6, Gojobori T.^1,6 and Sasaki T.³
The Rice Annotation Project database
database summary
RAPID
Resource of Asian Primary Immunodeficiency Diseases
database summary
RARGE - RIKEN Arabidopsis Genome Encyclopedia
Arabidopsis cDNAs, mutants and microarray data
database summary
Rat Genome Database Twigger, S.N.¹, Shimoyama, M.¹, Lu, J.¹, Pasko, D.¹, Bromberg, S.¹, Chen, C.F.¹, Chen, J.¹, Gopinathrao, G.¹, Nigam, R.¹, Ramachandran, H.¹, Mathis, J.¹, Nie, J.¹, Maltais, L.², Eppig, J.T.², Maglott, D.³, Schuler, G.³, Jacob, H.J⁴, Tonellato, P.J.¹
Rat genetic and genomic data
database summary
RatMap StÅhl F.^1,2, Levan G.¹, Ilenius N.¹, Johnson P.¹, Petersen G.¹, Andersson L.¹, Klinga-Levan K.³ and GÓmez-Fabre P.M.¹
Rat genome tools and data
database summary
RB1 Gene Mutation Database
Mutations in the human retinoblastoma (RB1) gene
database summary
RBPDB Kate B. Cook, Hilal Kazan, Khalid Zuberi, Quaid Morris, and Timothy R. Hughes
RNA-binding proteins and their specificities
database summary
Reactome Joshi-Tope G.¹, Vastrik I.², Gopinathrao G.¹, Wu G.¹, Matthews L.¹, Gillespie M.^1,5, Arva A.¹, D'Eustachio P.^1,3, Schmidt E.², Jassal B.², de Bono B.², Lewis S.⁴, Birney E.² and Stein L.D¹
A database of metabolic and signaling pathways
database summary
REBASE Roberts, R.J., Vincze, T., Posfai, J., and Macelis, D.
Enzymes and genes for DNA restriction and modification
database summary
RECODE Hammer A.H.¹, Atkins J.F.¹, Fayet O.², Gesteland R.F.¹, Giddings M.C.^1,6, Gladyshev V.N.³, Gurvich O.L.¹, W. Allen Miller W.A.⁴, Namy O.⁵, PrÈre M.F.², Zhang Y.³ and Baranov P.V.¹
Genes using programmed translational recoding in their expression
database summary
RecountDB Paul Horton
Recalculated transcript amounts database
database summary
REDfly
Regulatory modules and transcription factor binding sites in Drosophila
database summary
REDIdb
An RNA editing database
database summary
RefExA
Reference database for human gene expression analysis
database summary
REFOLD Buckle A.M.
Experimental data on protein refolding and purification
database summary
RefSeq Pruitt K.D and Maglott D.R.
Reference sequence standards for genomes, genes, transcripts, and proteins
database summary
RegPhos Tzong-Yi Lee ¹, Justin Bo-Kai Hsu ², Wen-Chi Chang ³ and Hsien-Da Huang ^2,4,5
Regulatory Network in Protein Phosphorylation
database summary
RegPrecise Pavel S. Novichkov, Olga N. Laikova, Elena S. Novichkova, Mikhail S. Gelfand, Adam P. Arkin, Inna Dubchak, and Dmitry A. Rodionov
Predicted regulons in prokaryotic genomes
database summary
RegTransBase Kazakov A.E.¹, Cipriano M.J.², Novichkov P.S.^3,4, Minovitsky S.², Vinogradov D.V.¹, Arkin A.^2,4,5,6, Mironov A.A.^1,7,8, Gelfand M.S.^1,7,8,10, Dubchak I.^2,9,10
Manually curated database of regulatory interactions in prokaryotes
database summary